Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_101124 | Not Available | Positive | 174206 - 174496 | 11370.5 |
| hypothetical protein | SAMN05421820_101125 | Not Available | Positive | 174512 - 175000 | 18547.6 |
| protein of unknown function | SAMN05421820_101126 | Not Available | Positive | 175198 - 175890 | 26733.0 |
| orf6n domain-containing protein | SAMN05421820_101127 | Not Available | Positive | 175924 - 176475 | 21286.1 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421820_101128 | Not Available | Negative | 176472 - 177194 | 27301.0 |
| uncharacterized conserved protein yegp, upf0339 family | SAMN05421820_101129 | Not Available | Positive | 177373 - 177744 | 14135.6 |
| tetratricopeptide repeat-containing protein | SAMN05421820_101130 | Not Available | Positive | 178116 - 181022 | 110053.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_101131 | Not Available | Positive | 181176 - 181742 | 22158.9 |
| protein of unknown function | SAMN05421820_101132 | Not Available | Positive | 181812 - 182774 | 36882.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_101133 | Not Available | Positive | 182893 - 186420 | 130790.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

