Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trypsin-like peptidase domain-containing protein | SAMN05421820_102491 | Not Available | Positive | 1623128 - 1624225 | 40449.4 |
| hypothetical protein | SAMN05421820_102492 | Not Available | Negative | 1624336 - 1625616 | 49038.0 |
| alpha-1,2-mannosidase, putative | SAMN05421820_102493 | Not Available | Positive | 1625802 - 1628117 | 87047.5 |
| beta-glucosidase | SAMN05421820_102494 | Not Available | Positive | 1628143 - 1631835 | 135073.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_102495 | Not Available | Positive | 1631934 - 1634975 | 110698.0 |
| starch-binding associating with outer membrane | SAMN05421820_102496 | Not Available | Positive | 1634986 - 1636425 | 53300.6 |
| pectate lyase superfamily protein | SAMN05421820_102497 | Not Available | Positive | 1636463 - 1638466 | 72069.0 |
| uncharacterized conserved protein yece, duf72 family | SAMN05421820_102498 | Not Available | Positive | 1638731 - 1639678 | 36385.3 |
| alkyl hydroperoxide reductase subunit ahpc (peroxiredoxin) | SAMN05421820_102499 | Not Available | Positive | 1639731 - 1640366 | 23435.8 |
| hypothetical protein | SAMN05421820_102500 | Not Available | Positive | 1640437 - 1640946 | 19021.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

