Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase a | SAMN05421820_102481 | Not Available | Positive | 1612883 - 1614988 | 77974.6 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN05421820_102482 | Not Available | Positive | 1615033 - 1615743 | 26476.3 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | SAMN05421820_102483 | Not Available | Positive | 1615797 - 1617116 | 49274.1 |
| prolipoprotein diacylglyceryltransferase | SAMN05421820_102484 | Not Available | Positive | 1617148 - 1618302 | 43254.6 |
| myo-inositol-1(or 4)-monophosphatase | SAMN05421820_102485 | Not Available | Positive | 1618315 - 1619109 | 29532.1 |
| fe-s cluster biogenesis protein nfua, 4fe-4s-binding domain | SAMN05421820_102486 | Not Available | Negative | 1619197 - 1619748 | 20331.1 |
| adenylosuccinate lyase | SAMN05421820_102487 | Not Available | Negative | 1619826 - 1621172 | 50672.1 |
| hypothetical protein | SAMN05421820_102488 | Not Available | Negative | 1621313 - 1621537 | 7515.73 |
| hypothetical protein | SAMN05421820_102489 | Not Available | Negative | 1622129 - 1622341 | 7232.54 |
| rna polymerase sigma factor, sigma-70 family | SAMN05421820_102490 | Not Available | Positive | 1622551 - 1623120 | 21938.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

