Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 88 | SAMN05421820_102471 | Not Available | Positive | 1600668 - 1601870 | 45616.8 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | SAMN05421820_102472 | Not Available | Positive | 1601970 - 1602812 | 31401.1 |
| protein of unknown function | SAMN05421820_102473 | Not Available | Positive | 1602894 - 1604012 | 41173.2 |
| 2-deoxy-d-gluconate 3-dehydrogenase | SAMN05421820_102474 | Not Available | Positive | 1604037 - 1604807 | 27377.7 |
| arylsulfatase | SAMN05421820_102475 | Not Available | Positive | 1604785 - 1606254 | 53664.4 |
| hexosaminidase | SAMN05421820_102476 | Not Available | Positive | 1606260 - 1607888 | 61512.9 |
| hypothetical protein | SAMN05421820_102477 | Not Available | Positive | 1608044 - 1609300 | 47172.2 |
| hypothetical protein | SAMN05421820_102478 | Not Available | Negative | 1609385 - 1609771 | 14625.8 |
| alpha-l-fucosidase | SAMN05421820_102479 | Not Available | Negative | 1609898 - 1611742 | 69018.2 |
| arac-type dna-binding protein | SAMN05421820_102480 | Not Available | Negative | 1611833 - 1612702 | 33672.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

