Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421820_102401 | Not Available | Negative | 1518202 - 1518678 | 17929.8 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05421820_102402 | Not Available | Negative | 1518690 - 1519511 | 31428.6 |
| abc-2 type transport system permease protein | SAMN05421820_102403 | Not Available | Negative | 1519589 - 1520956 | 52819.9 |
| abc-2 type transport system permease protein | SAMN05421820_102404 | Not Available | Negative | 1520964 - 1522409 | 54262.3 |
| iron complex outermembrane recepter protein | SAMN05421820_102405 | Not Available | Negative | 1522429 - 1524927 | 93270.9 |
| abc-2 type transport system atp-binding protein | SAMN05421820_102406 | Not Available | Negative | 1524928 - 1525623 | 25024.4 |
| phytanoyl-coa dioxygenase (phyh) | SAMN05421820_102407 | Not Available | Positive | 1526110 - 1526829 | 27115.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421820_102408 | Not Available | Positive | 1527220 - 1528614 | 52767.4 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421820_102409 | Not Available | Negative | 1528640 - 1529263 | 23549.4 |
| signal transduction histidine kinase | SAMN05421820_102410 | Not Available | Negative | 1529308 - 1532085 | 103807.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

