Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421820_101114 | Not Available | Positive | 157352 - 157852 | 18458.0 |
| hypothetical protein | SAMN05421820_101115 | Not Available | Positive | 157870 - 160551 | 99393.5 |
| hypothetical protein | SAMN05421820_101116 | Not Available | Positive | 160548 - 161579 | 39781.4 |
| hypothetical protein | SAMN05421820_101117 | Not Available | Positive | 161583 - 162593 | 38314.1 |
| pif1-like helicase | SAMN05421820_101118 | Not Available | Negative | 162700 - 164613 | 71988.4 |
| virulence protein (virj) | SAMN05421820_101119 | Not Available | Negative | 164642 - 165379 | 28238.3 |
| chromosomal replication initiator protein | SAMN05421820_101120 | Not Available | Positive | 165660 - 167093 | 54076.3 |
| hypothetical protein | SAMN05421820_101121 | Not Available | Positive | 167435 - 167653 | 8072.72 |
| yd repeat-containing protein | SAMN05421820_101122 | Not Available | Positive | 167770 - 170829 | 116383.0 |
| rhs repeat-associated core domain-containing protein | SAMN05421820_101123 | Not Available | Positive | 170841 - 174206 | 123936.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

