Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_102391 | Not Available | Negative | 1510147 - 1510509 | 13690.1 |
| hypothetical protein | SAMN05421820_102392 | Not Available | Negative | 1510730 - 1511416 | 24721.7 |
| hypothetical protein | SAMN05421820_102393 | Not Available | Negative | 1511439 - 1512122 | 24967.9 |
| dinb superfamily protein | SAMN05421820_102394 | Not Available | Positive | 1512361 - 1512846 | 18986.1 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05421820_102395 | Not Available | Positive | 1512936 - 1513568 | 22542.5 |
| glycosyl transferase family 11 | SAMN05421820_102396 | Not Available | Positive | 1513852 - 1514691 | 32655.8 |
| pas domain s-box-containing protein | SAMN05421820_102397 | Not Available | Positive | 1514885 - 1516378 | 55787.5 |
| hypothetical protein | SAMN05421820_102398 | Not Available | Negative | 1516381 - 1516863 | 18408.8 |
| hypothetical protein | SAMN05421820_102399 | Not Available | Negative | 1516866 - 1517339 | 17637.9 |
| protein n-acetyltransferase, rimj/riml family | SAMN05421820_102400 | Not Available | Negative | 1517619 - 1518212 | 22589.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

