Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-selenouridine synthase | SAMN05421820_102381 | Not Available | Positive | 1500435 - 1501478 | 39463.5 |
| selenide, water dikinase | SAMN05421820_102382 | Not Available | Positive | 1501488 - 1502537 | 36807.2 |
| arac-type dna-binding protein | SAMN05421820_102383 | Not Available | Positive | 1502573 - 1503445 | 33136.6 |
| uncharacterized zinc-type alcohol dehydrogenase-like protein | SAMN05421820_102384 | Not Available | Positive | 1503535 - 1504608 | 38395.2 |
| arac-type dna-binding protein | SAMN05421820_102385 | Not Available | Positive | 1504700 - 1505557 | 33514.0 |
| methyltransferase domain-containing protein | SAMN05421820_102386 | Not Available | Positive | 1505692 - 1506330 | 24021.8 |
| hypothetical protein | SAMN05421820_102387 | Not Available | Positive | 1506515 - 1506643 | 5250.17 |
| n-terminal domain of peptidase_s41 | SAMN05421820_102388 | Not Available | Negative | 1506664 - 1507995 | 49193.7 |
| hypothetical protein | SAMN05421820_102389 | Not Available | Negative | 1508065 - 1508886 | 30539.2 |
| hypothetical protein | SAMN05421820_102390 | Not Available | Negative | 1509013 - 1510002 | 37632.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

