Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_102371 | Not Available | Negative | 1492827 - 1493390 | 21874.3 |
| gamma-butyrobetaine dioxygenase | SAMN05421820_102372 | Not Available | Positive | 1493702 - 1494847 | 44294.0 |
| gamma-butyrobetaine dioxygenase | SAMN05421820_102373 | Not Available | Positive | 1494851 - 1496035 | 44863.2 |
| hdig domain-containing protein | SAMN05421820_102374 | Not Available | Positive | 1496056 - 1496646 | 22267.5 |
| hypothetical protein | SAMN05421820_102375 | Not Available | Positive | 1496624 - 1497952 | 50066.2 |
| hypothetical protein | SAMN05421820_102376 | Not Available | Negative | 1498073 - 1498306 | 8807.26 |
| hypothetical protein | SAMN05421820_102377 | Not Available | Positive | 1498340 - 1498867 | 19583.4 |
| hypothetical protein | SAMN05421820_102378 | Not Available | Negative | 1498870 - 1499151 | 10349.4 |
| regulatory protein, tetr family | SAMN05421820_102379 | Not Available | Positive | 1499238 - 1499786 | 20668.1 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN05421820_102380 | Not Available | Positive | 1499829 - 1500422 | 22755.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

