Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_102351 | Not Available | Negative | 1462400 - 1463059 | 24705.9 |
| pap2 superfamily protein | SAMN05421820_102352 | Not Available | Negative | 1463200 - 1463994 | 29076.7 |
| rna polymerase sigma factor, sigma-70 family | SAMN05421820_102353 | Not Available | Positive | 1464790 - 1465341 | 21713.4 |
| fecr protein | SAMN05421820_102354 | Not Available | Positive | 1465438 - 1466508 | 41500.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_102355 | Not Available | Positive | 1466558 - 1469923 | 122127.0 |
| susd and ragb outer membrane lipoprotein | SAMN05421820_102356 | Not Available | Positive | 1470043 - 1471671 | 59308.5 |
| predicted alpha/beta hydrolase | SAMN05421820_102357 | Not Available | Positive | 1471838 - 1472722 | 33836.7 |
| hypothetical protein | SAMN05421820_102358 | Not Available | Positive | 1472810 - 1473430 | 23904.7 |
| helix-turn-helix domain-containing protein | SAMN05421820_102359 | Not Available | Positive | 1473581 - 1474699 | 42757.4 |
| proline iminopeptidase | SAMN05421820_102360 | Not Available | Positive | 1474772 - 1475767 | 37316.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

