Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | SAMN05421820_102321 | Not Available | Negative | 1410683 - 1411912 | 45163.6 |
| susd family protein | SAMN05421820_102322 | Not Available | Negative | 1411929 - 1413365 | 52370.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_102323 | Not Available | Negative | 1413377 - 1416625 | 118435.0 |
| fecr protein | SAMN05421820_102324 | Not Available | Negative | 1416866 - 1418023 | 42937.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_102325 | Not Available | Negative | 1418121 - 1418696 | 22308.7 |
| predicted dna-binding transcriptional regulator alpa | SAMN05421820_102326 | Not Available | Negative | 1418955 - 1419266 | 12076.0 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN05421820_102327 | Not Available | Negative | 1419297 - 1420730 | 55004.9 |
| hypothetical protein | SAMN05421820_102328 | Not Available | Positive | 1421241 - 1421876 | 23306.9 |
| hypothetical protein | SAMN05421820_102329 | Not Available | Negative | 1421980 - 1424370 | 88721.8 |
| hypothetical protein | SAMN05421820_102330 | Not Available | Positive | 1424567 - 1425874 | 49536.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

