Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05421820_102311 | Not Available | Positive | 1403338 - 1403802 | 17995.7 |
| doxx-like family protein | SAMN05421820_102312 | Not Available | Positive | 1403836 - 1404243 | 15221.2 |
| protein of unknown function (du1801) | SAMN05421820_102313 | Not Available | Positive | 1404249 - 1404539 | 11020.4 |
| bacteriocin-protection, ydei or ompd-associated | SAMN05421820_102314 | Not Available | Positive | 1404545 - 1404826 | 10591.9 |
| hypothetical protein | SAMN05421820_102315 | Not Available | Negative | 1404845 - 1405048 | 8050.72 |
| hypothetical protein | SAMN05421820_102316 | Not Available | Negative | 1405076 - 1405909 | 32762.8 |
| hypothetical protein | SAMN05421820_102317 | Not Available | Positive | 1406054 - 1406299 | 9117.64 |
| alpha/beta hydrolase fold | SAMN05421820_102318 | Not Available | Negative | 1406444 - 1407247 | 29126.6 |
| caax protease self-immunity | SAMN05421820_102319 | Not Available | Negative | 1407351 - 1408043 | 26774.8 |
| ftsx-like permease family protein | SAMN05421820_102320 | Not Available | Positive | 1408273 - 1410645 | 88147.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

