Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421820_102301 | Not Available | Positive | 1385455 - 1386426 | 36426.4 |
| alpha-1,2-mannosidase, putative | SAMN05421820_102302 | Not Available | Positive | 1386433 - 1388718 | 86212.6 |
| helix-turn-helix domain-containing protein | SAMN05421820_102303 | Not Available | Negative | 1388727 - 1389491 | 28650.7 |
| two component regulator propeller | SAMN05421820_102304 | Not Available | Negative | 1389476 - 1392685 | 122105.0 |
| alpha-l-rhamnosidase | SAMN05421820_102305 | Not Available | Positive | 1392895 - 1395630 | 101668.0 |
| hypothetical protein | SAMN05421820_102306 | Not Available | Negative | 1395722 - 1396363 | 23234.1 |
| rna recognition motif. (a.k.a. rrm, rbd, or rnp domain) | SAMN05421820_102307 | Not Available | Negative | 1396849 - 1397142 | 10997.7 |
| beta-galactosidase | SAMN05421820_102308 | Not Available | Negative | 1397301 - 1399850 | 95689.4 |
| glycosyl hydrolases family 38 n-terminal domain-containing protein | SAMN05421820_102309 | Not Available | Negative | 1399919 - 1402594 | 99175.5 |
| dna-binding transcriptional regulator, arsr family | SAMN05421820_102310 | Not Available | Positive | 1403011 - 1403331 | 12330.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

