Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| solute:na+ symporter, sss family | SAMN05421820_102291 | Not Available | Negative | 1364586 - 1366190 | 58648.1 |
| duf1680 family protein | SAMN05421820_102292 | Not Available | Negative | 1366240 - 1368762 | 93719.6 |
| glycosyl hydrolase family 76 | SAMN05421820_102293 | Not Available | Positive | 1369286 - 1370395 | 42797.4 |
| glycosyl hydrolases family 2, tim barrel domain | SAMN05421820_102294 | Not Available | Positive | 1370554 - 1372449 | 71421.3 |
| protein of unknown function | SAMN05421820_102295 | Not Available | Positive | 1372478 - 1374940 | 91346.2 |
| aldose 1-epimerase | SAMN05421820_102296 | Not Available | Positive | 1374974 - 1376137 | 42321.0 |
| protein of unknown function | SAMN05421820_102297 | Not Available | Positive | 1376162 - 1378690 | 93584.5 |
| ipt/tig domain-containing protein | SAMN05421820_102298 | Not Available | Positive | 1379023 - 1380348 | 49959.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_102299 | Not Available | Positive | 1380366 - 1383434 | 114703.0 |
| starch-binding associating with outer membrane | SAMN05421820_102300 | Not Available | Positive | 1383445 - 1385448 | 75973.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

