Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aerobic c4-dicarboxylate transport protein | SAMN05421820_102281 | Not Available | Positive | 1345763 - 1346950 | 42816.4 |
| regulatory protein, gntr family | SAMN05421820_102282 | Not Available | Positive | 1347028 - 1348050 | 39434.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_102283 | Not Available | Positive | 1348330 - 1351521 | 118596.0 |
| starch-binding associating with outer membrane | SAMN05421820_102284 | Not Available | Positive | 1351537 - 1353432 | 72322.9 |
| protein of unknown function | SAMN05421820_102285 | Not Available | Positive | 1353499 - 1354650 | 42902.8 |
| protein of unknown function | SAMN05421820_102286 | Not Available | Positive | 1354672 - 1355847 | 43213.5 |
| alpha-l-fucosidase 2 | SAMN05421820_102287 | Not Available | Positive | 1355942 - 1358284 | 86403.3 |
| alpha-galactosidase | SAMN05421820_102288 | Not Available | Positive | 1358338 - 1360326 | 73633.5 |
| alpha-galactosidase | SAMN05421820_102289 | Not Available | Positive | 1360353 - 1362563 | 83617.3 |
| sialate o-acetylesterase | SAMN05421820_102290 | Not Available | Positive | 1362582 - 1364585 | 73187.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

