Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_102271 | Not Available | Negative | 1335059 - 1335463 | 15745.7 |
| nucleotide-binding universal stress protein, uspa family | SAMN05421820_102272 | Not Available | Positive | 1335611 - 1336201 | 21759.3 |
| hypothetical protein | SAMN05421820_102273 | Not Available | Negative | 1336213 - 1336998 | 30362.4 |
| bifunctional non-homologous end joining protein ligd | SAMN05421820_102274 | Not Available | Positive | 1337196 - 1339754 | 96963.9 |
| dna end-binding protein ku | SAMN05421820_102275 | Not Available | Positive | 1339771 - 1340535 | 29361.8 |
| hypothetical protein | SAMN05421820_102276 | Not Available | Positive | 1340647 - 1341114 | 17237.9 |
| dna-binding response regulator, lytr/algr family | SAMN05421820_102277 | Not Available | Negative | 1341158 - 1341835 | 26052.9 |
| ghkl domain-containing protein | SAMN05421820_102278 | Not Available | Negative | 1341832 - 1342860 | 39241.3 |
| hypothetical protein | SAMN05421820_102279 | Not Available | Positive | 1343081 - 1344400 | 49271.8 |
| aerobic c4-dicarboxylate transport protein | SAMN05421820_102280 | Not Available | Positive | 1344415 - 1345716 | 46815.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

