Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN05421820_102261 | Not Available | Positive | 1324417 - 1325928 | 55673.5 |
| thioredoxin-like | SAMN05421820_102262 | Not Available | Positive | 1325961 - 1327148 | 44074.9 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421820_102263 | Not Available | Positive | 1327179 - 1328336 | 44529.6 |
| hypothetical protein | SAMN05421820_102264 | Not Available | Positive | 1328415 - 1328954 | 19659.8 |
| outer membrane protein | SAMN05421820_102265 | Not Available | Negative | 1329017 - 1329706 | 24834.2 |
| helix-turn-helix domain-containing protein | SAMN05421820_102266 | Not Available | Positive | 1329780 - 1330766 | 38083.5 |
| calcineurin-like phosphoesterase superfamily protein | SAMN05421820_102267 | Not Available | Negative | 1330777 - 1331370 | 22996.2 |
| isopentenyl-diphosphate delta-isomerase | SAMN05421820_102268 | Not Available | Negative | 1331398 - 1331931 | 20536.2 |
| hypothetical protein | SAMN05421820_102269 | Not Available | Positive | 1332336 - 1334522 | 83243.5 |
| hypothetical protein | SAMN05421820_102270 | Not Available | Negative | 1334586 - 1334840 | 9247.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

