Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr protein | SAMN05421820_102241 | Not Available | Positive | 1300009 - 1301169 | 43150.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_102242 | Not Available | Positive | 1301319 - 1304834 | 128567.0 |
| susd family protein | SAMN05421820_102243 | Not Available | Positive | 1304853 - 1306259 | 51630.6 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421820_102244 | Not Available | Positive | 1306286 - 1307461 | 44167.2 |
| peroxiredoxin | SAMN05421820_102245 | Not Available | Positive | 1307469 - 1308539 | 40141.1 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421820_102246 | Not Available | Positive | 1308554 - 1309738 | 44383.5 |
| nad dependent epimerase/dehydratase family protein | SAMN05421820_102247 | Not Available | Positive | 1310219 - 1310881 | 24565.3 |
| tigr02453 family protein | SAMN05421820_102248 | Not Available | Positive | 1310907 - 1311599 | 26618.3 |
| hypothetical protein | SAMN05421820_102249 | Not Available | Positive | 1311603 - 1312037 | 16682.5 |
| nudix domain-containing protein | SAMN05421820_102250 | Not Available | Negative | 1312443 - 1312871 | 16028.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

