Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421820_102231 | Not Available | Positive | 1290453 - 1291139 | 26363.1 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421820_102232 | Not Available | Positive | 1291261 - 1294041 | 102923.0 |
| glpgli family protein | SAMN05421820_102233 | Not Available | Positive | 1294047 - 1294688 | 23133.1 |
| arac-type dna-binding protein | SAMN05421820_102234 | Not Available | Positive | 1294747 - 1295538 | 30421.8 |
| hypothetical protein | SAMN05421820_102235 | Not Available | Positive | 1295616 - 1296044 | 15515.0 |
| hypothetical protein | SAMN05421820_102236 | Not Available | Positive | 1296118 - 1296540 | 15763.1 |
| hypothetical protein | SAMN05421820_102237 | Not Available | Positive | 1296558 - 1296662 | 4036.79 |
| signal transduction histidine kinase | SAMN05421820_102238 | Not Available | Positive | 1296763 - 1298802 | 77443.4 |
| hypothetical protein | SAMN05421820_102239 | Not Available | Negative | 1298821 - 1299051 | 8738.48 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_102240 | Not Available | Positive | 1299341 - 1299925 | 22765.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

