Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN05421820_102211 | Not Available | Positive | 1263766 - 1264131 | 13778.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421820_102212 | Not Available | Positive | 1264208 - 1264963 | 26629.8 |
| protein of unknown function | SAMN05421820_102213 | Not Available | Positive | 1265057 - 1266214 | 42819.0 |
| hypothetical protein | SAMN05421820_102214 | Not Available | Positive | 1266217 - 1266936 | 27217.6 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN05421820_102215 | Not Available | Negative | 1267020 - 1270298 | 120214.0 |
| 3',5'-cyclic-nucleotide phosphodiesterase | SAMN05421820_102216 | Not Available | Negative | 1270354 - 1271313 | 36119.8 |
| f5/8 type c domain-containing protein | SAMN05421820_102217 | Not Available | Negative | 1271394 - 1273049 | 59845.7 |
| starch-binding associating with outer membrane | SAMN05421820_102218 | Not Available | Negative | 1273102 - 1274748 | 62339.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_102219 | Not Available | Negative | 1274777 - 1278034 | 120586.0 |
| fecr protein | SAMN05421820_102220 | Not Available | Negative | 1278254 - 1279399 | 42889.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

