Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| surface antigen | SAMN05421820_102201 | Not Available | Positive | 1253384 - 1254616 | 46331.9 |
| iron complex outermembrane recepter protein | SAMN05421820_102202 | Not Available | Positive | 1255027 - 1257792 | 99724.6 |
| dinb superfamily protein | SAMN05421820_102203 | Not Available | Negative | 1257849 - 1258328 | 18304.8 |
| l,d-transpeptidase catalytic domain | SAMN05421820_102204 | Not Available | Positive | 1258374 - 1259024 | 24108.7 |
| astacin (peptidase family m12a) | SAMN05421820_102205 | Not Available | Negative | 1259113 - 1259904 | 29058.8 |
| lipase (class 3) | SAMN05421820_102206 | Not Available | Positive | 1260045 - 1261136 | 41403.1 |
| hypothetical protein | SAMN05421820_102207 | Not Available | Negative | 1261084 - 1261185 | 3909.66 |
| ubia prenyltransferase family protein | SAMN05421820_102208 | Not Available | Positive | 1261212 - 1262126 | 35259.3 |
| methyltransferase domain-containing protein | SAMN05421820_102209 | Not Available | Positive | 1262123 - 1262764 | 24687.9 |
| tonb family c-terminal domain-containing protein | SAMN05421820_102210 | Not Available | Positive | 1262798 - 1263763 | 36251.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

