Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glycoside hydrolase family 18, chitinase_18 | SAMN05421820_10194 | Not Available | Negative | 132730 - 133782 | 38909.8 |
| fatty acid hydroxylase superfamily protein | SAMN05421820_10195 | Not Available | Negative | 133897 - 134610 | 27591.2 |
| asma protein | SAMN05421820_10196 | Not Available | Negative | 134629 - 137712 | 114057.0 |
| tetratricopeptide repeat-containing protein | SAMN05421820_10197 | Not Available | Positive | 137851 - 138348 | 18969.9 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05421820_10198 | Not Available | Negative | 138799 - 140097 | 48777.8 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN05421820_10199 | Not Available | Negative | 140129 - 141472 | 50214.8 |
| hlyd family secretion protein | SAMN05421820_101100 | Not Available | Positive | 141720 - 142976 | 46877.9 |
| putative abc transport system atp-binding protein | SAMN05421820_101101 | Not Available | Positive | 143054 - 143731 | 25430.7 |
| putative abc transport system permease protein | SAMN05421820_101102 | Not Available | Positive | 143781 - 146159 | 90827.4 |
| hypothetical protein | SAMN05421820_101103 | Not Available | Positive | 146223 - 146414 | 7096.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

