Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trove domain-containing protein | SAMN05421820_102161 | Not Available | Negative | 1211437 - 1213011 | 59930.4 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05421820_102162 | Not Available | Positive | 1213117 - 1214142 | 39800.6 |
| phosphoribosylformylglycinamidine synthase | SAMN05421820_102163 | Not Available | Positive | 1214215 - 1217886 | 133879.0 |
| hypothetical protein | SAMN05421820_102164 | Not Available | Positive | 1217895 - 1218017 | 4649.68 |
| hypothetical protein | SAMN05421820_102165 | Not Available | Negative | 1217961 - 1218746 | 29044.8 |
| dipeptidase e | SAMN05421820_102166 | Not Available | Positive | 1218925 - 1219629 | 26067.2 |
| inhibitor of kina | SAMN05421820_102167 | Not Available | Positive | 1219687 - 1220397 | 26138.6 |
| antagonist of kipi | SAMN05421820_102168 | Not Available | Positive | 1220387 - 1221352 | 34966.6 |
| upf0271 protein | SAMN05421820_102169 | Not Available | Positive | 1221345 - 1222145 | 27927.3 |
| mn2+ and fe2+ transporters of the nramp family | SAMN05421820_102170 | Not Available | Positive | 1222142 - 1223320 | 40925.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

