Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN05421820_102131 | Not Available | Positive | 1176252 - 1176893 | 24788.2 |
| hypothetical protein | SAMN05421820_102132 | Not Available | Positive | 1176968 - 1177759 | 28304.8 |
| hypothetical protein | SAMN05421820_102133 | Not Available | Positive | 1177764 - 1178321 | 20243.1 |
| hypothetical protein | SAMN05421820_102134 | Not Available | Positive | 1178339 - 1178752 | 15357.5 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05421820_102135 | Not Available | Positive | 1178791 - 1180194 | 51836.9 |
| hypothetical protein | SAMN05421820_102136 | Not Available | Positive | 1180214 - 1180726 | 19639.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_102137 | Not Available | Positive | 1180848 - 1181426 | 22394.1 |
| fecr protein | SAMN05421820_102138 | Not Available | Positive | 1181506 - 1182654 | 41971.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_102139 | Not Available | Positive | 1182911 - 1186213 | 120713.0 |
| susd family protein | SAMN05421820_102140 | Not Available | Positive | 1186267 - 1187706 | 52442.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

