Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase primary sigma factor | SAMN05421820_102121 | Not Available | Negative | 1163123 - 1163983 | 32664.1 |
| protein of unknown function | SAMN05421820_102122 | Not Available | Positive | 1164335 - 1164994 | 25060.1 |
| putative transcriptional regulator | SAMN05421820_102123 | Not Available | Positive | 1164997 - 1165206 | 7552.41 |
| hypothetical protein | SAMN05421820_102124 | Not Available | Negative | 1165279 - 1165608 | 12038.0 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05421820_102125 | Not Available | Negative | 1165737 - 1166576 | 31660.9 |
| dihydrolipoamide dehydrogenase | SAMN05421820_102126 | Not Available | Negative | 1166660 - 1168048 | 48918.2 |
| tonb-dependent receptor plug domain | SAMN05421820_102127 | Not Available | Positive | 1168381 - 1171521 | 113615.0 |
| hypothetical protein | SAMN05421820_102128 | Not Available | Negative | 1171592 - 1174576 | 112031.0 |
| uncharacterized membrane protein ykgb | SAMN05421820_102129 | Not Available | Negative | 1174681 - 1175259 | 20977.0 |
| arac-type dna-binding protein | SAMN05421820_102130 | Not Available | Negative | 1175325 - 1176191 | 32721.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

