Ferrimonas sediminum strain DSM 23317

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Ferrimonadaceae

Genus

Ferrimonas

Description

Ferrimonas sediminum strain DSM 23317 is a Gram-negative, rod-shaped bacterium that exhibits both facultative aerobe and anaerobe characteristics. This versatility in oxygen utilization allows it to thrive in varying environmental conditions. The strain possesses true flagella, which facilitate motility, thereby enhancing its ecological adaptability. Ferrimonas sediminum is categorized as mesophilic, with an optimal growth temperature of 25°C. This temperature preference indicates that the bacterium is well-suited for environments that are neither too hot nor too cold, aligning it with many terrestrial and aquatic ecosystems. The strain has a single replicon, suggesting a streamlined genetic organization that may contribute to its adaptability and survival in diverse habitats. The genomic data for Ferrimonas sediminum is documented under the accession number FNEM00000000.1, providing a basis for further research into its genetic and metabolic pathways. In summary, Ferrimonas sediminum strain DSM 23317 showcases a range of traits that facilitate its survival in fluctuating environments. Its Gram-negative nature, along with its motility and oxygen utilization capabilities, positions it as an important player in microbial communities, potentially influencing nutrient cycling and ecosystem dynamics in its natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyFerrimonadaceae
GenusFerrimonas
SpeciesFerrimonas sediminum
Strainstrain DSM 23317

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ferrimonas sediminum strain DSM 23317
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ferrimonas sediminum strain DSM 23317 genome assembly, contig:

Gene Summary

Adenine Count

936234 bp

Thymine Count

928564 bp

Guanine Count

1248066 bp

Cytosine Count

1257980 bp

Genome Length

4375383 bp

Protein-coding Genes

3941 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
regulator of rpod, rsd/algqSAMN04488540_101387Not AvailableNegative420289 - 42078318966.1
uroporphyrinogen decarboxylaseSAMN04488540_101388Not AvailablePositive421206 - 42227039409.4
pseudouridine kinaseSAMN04488540_101389Not AvailablePositive422420 - 42350838374.7
pseudouridine-5'-phosphate glycosidaseSAMN04488540_101390Not AvailablePositive423505 - 42442232191.6
uracil-dna glycosylaseSAMN04488540_101391Not AvailableNegative424483 - 42510323603.2
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN04488540_101392Not AvailablePositive425195 - 42776295077.8
short-chain dehydrogenaseSAMN04488540_101393Not AvailablePositive427804 - 42859828837.3
uncharacterized radical sam protein ygiqSAMN04488540_101394Not AvailablePositive428708 - 43098784317.1
hypothetical proteinSAMN04488540_101395Not AvailableNegative431042 - 43139812958.6
hypothetical proteinSAMN04488540_101396Not AvailableNegative431738 - 43204610520.2

Displaying genes 391 – 400 of 4013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.