Ferrimonas balearica DSM 9799

Gram-negativeBacilliMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Ferrimonadaceae

Genus

Ferrimonas

Description

Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) is a motile, facultatively anaerobic, non spore-forming Gram-negative bacterium isolated from the upper few centimeters of marine sediment of the Palma de Mallorca harbor, Spain. This is the first completed genome sequence of a member of the genus Ferrimonas. The generic name derives from the Latin word "ferrum" meaning "iron" and the Greek word "monas" meaning "unit", referring to an iron(III)-reducing cell. The cells are straight rods with rounded ends and appear singly, occasionally in pairs or short chains and usually not encapsulated. F. balearica is motile by means of monotrichous flagella. Colonies produce a black iron precipitate when the cells are grown on TSI agar, and are often brown and mucous when the cells are grown under aerobic conditions. F. balearica is of special interest because it is a chemoorganotroph and has a strictly respiratory metabolism with oxygen, nitrate, Fe(III)-oxyhydroxide, Fe(III)-citrate, MnO2, selenate, selenite and thiosul-fate as electron acceptors F. balearica requires a minimum of 0.5% NaCl for growth, with a range of NaCl tolerance of 0.5%-7.5%. It does not grow at 5 or 44 degrees Celsius but does grow at 42 degrees Celsius. The pH range for growth is 6-9. The genus Ferrimonas can be distinguished from other strictly respiratory Gram-negative genera of the Gammaproteobacteria based on its ability to reduce Fe(III), denitrification, growth at 42 degrees Celsius, presence of phenylalanine deaminase activity, inability to grow in NaCL-free media, lack of gelatinase, urease and a negative reaction of Simmons citrate test. (Adapted from PMID 21304747). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyFerrimonadaceae
GenusFerrimonas
SpeciesFerrimonas balearica
StrainDSM 9799

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Ferrimonas balearica DSM 9799
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNo

Genome Summary

Ferrimonas balearica DSM 9799

Accession NumberNC_014541.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3788 genes

Non-Coding Genes

149 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaFBAL_RS00005Not Available+337 - 170451350.4
dna polymerase iii subunit betaFBAL_RS00010Not Available+1718 - 281841091.4
dna replication/repair protein recfFBAL_RS00015Not Available+2818 - 388539903.9
dna topoisomerase (atp-hydrolyzing) subunit bFBAL_RS00020Not Available+3902 - 631989982.6
gmp reductaseFBAL_RS00025Not Available-6487 - 752437318.9
glycine--trna ligase subunit betaFBAL_RS00030Not Available-7749 - 984276106.4
glycine--trna ligase subunit alphaFBAL_RS00035Not Available-9850 - 1076134487.0
dna-3-methyladenine glycosylase iFBAL_RS00040Not Available+10878 - 1144721391.4
amidohydrolase family proteinFBAL_RS00045Not Available-11502 - 14696117926.0
sulfurtransferase tusaFBAL_RS00050Not Available-14814 - 150599118.02

Displaying genes 1 – 10 of 3937 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da

Displaying 1–10 of 88 metabolites