Ferrimonas sediminum strain DSM 23317

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Ferrimonadaceae

Genus

Ferrimonas

Description

Ferrimonas sediminum strain DSM 23317 is a Gram-negative, rod-shaped bacterium that exhibits both facultative aerobe and anaerobe characteristics. This versatility in oxygen utilization allows it to thrive in varying environmental conditions. The strain possesses true flagella, which facilitate motility, thereby enhancing its ecological adaptability. Ferrimonas sediminum is categorized as mesophilic, with an optimal growth temperature of 25°C. This temperature preference indicates that the bacterium is well-suited for environments that are neither too hot nor too cold, aligning it with many terrestrial and aquatic ecosystems. The strain has a single replicon, suggesting a streamlined genetic organization that may contribute to its adaptability and survival in diverse habitats. The genomic data for Ferrimonas sediminum is documented under the accession number FNEM00000000.1, providing a basis for further research into its genetic and metabolic pathways. In summary, Ferrimonas sediminum strain DSM 23317 showcases a range of traits that facilitate its survival in fluctuating environments. Its Gram-negative nature, along with its motility and oxygen utilization capabilities, positions it as an important player in microbial communities, potentially influencing nutrient cycling and ecosystem dynamics in its natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyFerrimonadaceae
GenusFerrimonas
SpeciesFerrimonas sediminum
Strainstrain DSM 23317

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ferrimonas sediminum strain DSM 23317
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ferrimonas sediminum strain DSM 23317 genome assembly, contig:

Gene Summary

Adenine Count

936234 bp

Thymine Count

928564 bp

Guanine Count

1248066 bp

Cytosine Count

1257980 bp

Genome Length

4375383 bp

Protein-coding Genes

3941 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
orotate phosphoribosyltransferaseSAMN04488540_11582Not AvailablePositive3426413 - 342712326153.3
transcriptional regulator, tetr familySAMN04488540_11583Not AvailableNegative3427244 - 342783722761.8
deoxyuridine 5'-triphosphate nucleotidohydrolaseSAMN04488540_11584Not AvailableNegative3427854 - 342831216110.4
phosphopantothenate-cysteine ligase /phosphopantothenoylcysteine decarboxylaseSAMN04488540_11585Not AvailableNegative3428322 - 342953342380.1
dna repair protein radcSAMN04488540_11586Not AvailablePositive3429636 - 343031024341.5
lsu ribosomal protein l28pSAMN04488540_11587Not AvailablePositive3430425 - 34306619112.3
lsu ribosomal protein l33pSAMN04488540_11588Not AvailablePositive3430673 - 34308436494.0
hypothetical proteinSAMN04488540_11589Not AvailablePositive3430944 - 343139616733.5
dna-(apurinic or apyrimidinic site) lyaseSAMN04488540_11590Not AvailablePositive3431389 - 343220129815.6
phosphopantetheine adenylyltransferaseSAMN04488540_11591Not AvailableNegative3432208 - 343269317718.4

Displaying genes 3111 – 3120 of 4013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.