Ferrimonas sediminum strain DSM 23317

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Ferrimonadaceae

Genus

Ferrimonas

Description

Ferrimonas sediminum strain DSM 23317 is a Gram-negative, rod-shaped bacterium that exhibits both facultative aerobe and anaerobe characteristics. This versatility in oxygen utilization allows it to thrive in varying environmental conditions. The strain possesses true flagella, which facilitate motility, thereby enhancing its ecological adaptability. Ferrimonas sediminum is categorized as mesophilic, with an optimal growth temperature of 25°C. This temperature preference indicates that the bacterium is well-suited for environments that are neither too hot nor too cold, aligning it with many terrestrial and aquatic ecosystems. The strain has a single replicon, suggesting a streamlined genetic organization that may contribute to its adaptability and survival in diverse habitats. The genomic data for Ferrimonas sediminum is documented under the accession number FNEM00000000.1, providing a basis for further research into its genetic and metabolic pathways. In summary, Ferrimonas sediminum strain DSM 23317 showcases a range of traits that facilitate its survival in fluctuating environments. Its Gram-negative nature, along with its motility and oxygen utilization capabilities, positions it as an important player in microbial communities, potentially influencing nutrient cycling and ecosystem dynamics in its natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyFerrimonadaceae
GenusFerrimonas
SpeciesFerrimonas sediminum
Strainstrain DSM 23317

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ferrimonas sediminum strain DSM 23317
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ferrimonas sediminum strain DSM 23317 genome assembly, contig:

Gene Summary

Adenine Count

936234 bp

Thymine Count

928564 bp

Guanine Count

1248066 bp

Cytosine Count

1257980 bp

Genome Length

4375383 bp

Protein-coding Genes

3941 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
(p)ppgpp synthetase i, spot/relaSAMN04488540_10421Not AvailableNegative1353162 - 135536683021.6
23s rrna m(5)u-1939 methyltransferaseSAMN04488540_10422Not AvailableNegative1355479 - 135680748518.6
hpt sensor hybrid histidine kinaseSAMN04488540_10423Not AvailablePositive1356943 - 1359669101318.0
hypothetical proteinSAMN04488540_10424Not AvailablePositive1359683 - 136027622273.6
regulatory protein, tetr familySAMN04488540_10425Not AvailableNegative1360309 - 136105528578.6
thiol:disulfide interchange protein dsbaSAMN04488540_10426Not AvailablePositive1361297 - 136190822350.1
disulfide bond formation protein dsbbSAMN04488540_10427Not AvailablePositive1361920 - 136254622902.1
nucleoside-specific channel-forming protein, tsxSAMN04488540_10428Not AvailablePositive1362597 - 136335227501.8
arylsulfate sulfotransferaseSAMN04488540_10429Not AvailablePositive1363386 - 136509564091.5
anaerobic selenocysteine-containing dehydrogenaseSAMN04488540_10430Not AvailablePositive1365446 - 136806797424.5

Displaying genes 1251 – 1260 of 4013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.