Rhodococcus triatomae strain DSM 44892

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus triatomae strain DSM 44892 is a notable bacterium characterized by the presence of flagella, which may contribute to its motility and adaptability in various environments. This strain has a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and regulation of its genomic functions. The genomic information for this strain is cataloged under the accession number FNDN00000000.1, which provides a reference for researchers interested in further exploring its genetic and functional attributes. Rhodococcus species, including R. triatomae, are known for their diverse metabolic capabilities, particularly in the biodegradation of various organic compounds. The presence of flagella in R. triatomae suggests potential advantages in environmental niches where mobility is beneficial for accessing nutrients or avoiding unfavorable conditions. This motility could enhance the bacterium's ecological role in soil and other environments where organic matter is abundant. The single replicon and the lack of complex replicon structures may indicate a level of genetic stability, which can be advantageous in maintaining essential functions necessary for survival and adaptation. Overall, the traits of Rhodococcus triatomae strain DSM 44892 highlight its potential ecological significance in nutrient cycling and biodegradation processes, particularly in environments rich in organic pollutants.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus triatomae
Strainstrain DSM 44892

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus triatomae strain DSM 44892 genome assembly, contig:

Gene Summary

Adenine Count

745590 bp

Thymine Count

734976 bp

Guanine Count

1605386 bp

Cytosine Count

1648546 bp

Genome Length

4734498 bp

Protein-coding Genes

4432 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05444695_11216Not AvailableNegative3775405 - 377578813317.2
pyridoxamine 5'-phosphate oxidase family proteinSAMN05444695_11217Not AvailablePositive3775907 - 377629314116.8
pimeloyl-acp methyl ester carboxylesteraseSAMN05444695_11218Not AvailableNegative3776539 - 377741131435.6
dna binding domain-containing protein, excisionase familySAMN05444695_11219Not AvailableNegative3777408 - 377783915810.9
alkane 1-monooxygenaseSAMN05444695_11220Not AvailablePositive3778058 - 377924845267.1
rubredoxinSAMN05444695_11221Not AvailablePositive3779245 - 37794306576.58
rubredoxinSAMN05444695_11222Not AvailablePositive3779464 - 37796557228.24
nadph-dependent 2,4-dienoyl-coa reductase, sulfur reductaseSAMN05444695_11223Not AvailablePositive3779652 - 378089043299.3
dna-binding transcriptional regulator, acrr familySAMN05444695_11224Not AvailablePositive3780887 - 378156724949.7
all-trans-retinol dehydrogenase (nad+)SAMN05444695_11225Not AvailableNegative3781548 - 378235728708.7

Displaying genes 3581 – 3590 of 3964 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.