Rhodococcus triatomae strain DSM 44892

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus triatomae strain DSM 44892 is a notable bacterium characterized by the presence of flagella, which may contribute to its motility and adaptability in various environments. This strain has a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and regulation of its genomic functions. The genomic information for this strain is cataloged under the accession number FNDN00000000.1, which provides a reference for researchers interested in further exploring its genetic and functional attributes. Rhodococcus species, including R. triatomae, are known for their diverse metabolic capabilities, particularly in the biodegradation of various organic compounds. The presence of flagella in R. triatomae suggests potential advantages in environmental niches where mobility is beneficial for accessing nutrients or avoiding unfavorable conditions. This motility could enhance the bacterium's ecological role in soil and other environments where organic matter is abundant. The single replicon and the lack of complex replicon structures may indicate a level of genetic stability, which can be advantageous in maintaining essential functions necessary for survival and adaptation. Overall, the traits of Rhodococcus triatomae strain DSM 44892 highlight its potential ecological significance in nutrient cycling and biodegradation processes, particularly in environments rich in organic pollutants.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus triatomae
Strainstrain DSM 44892

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus triatomae strain DSM 44892 genome assembly, contig:

Gene Summary

Adenine Count

745590 bp

Thymine Count

734976 bp

Guanine Count

1605386 bp

Cytosine Count

1648546 bp

Genome Length

4734498 bp

Protein-coding Genes

4432 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase familySAMN05444695_11174Not AvailableNegative3682807 - 368418650661.0
flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase)SAMN05444695_11175Not AvailableNegative3684183 - 368540643578.9
peptide/nickel transport system atp-binding proteinSAMN05444695_11176Not AvailableNegative3685399 - 368703058891.6
peptide/nickel transport system permease proteinSAMN05444695_11177Not AvailableNegative3687027 - 368792630988.3
peptide/nickel transport system permease proteinSAMN05444695_11178Not AvailableNegative3687919 - 368893235749.6
peptide/nickel transport system substrate-binding proteinSAMN05444695_11179Not AvailableNegative3688938 - 369057257881.9
flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase)SAMN05444695_11180Not AvailableNegative3690715 - 369176739346.3
hypothetical proteinSAMN05444695_11181Not AvailablePositive3692121 - 369288226289.1
nagd proteinSAMN05444695_11182Not AvailablePositive3692911 - 36930665766.81
hypothetical proteinSAMN05444695_11183Not AvailablePositive3693197 - 369356213912.4

Displaying genes 3481 – 3490 of 3964 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.