Rhodococcus triatomae strain DSM 44892

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus triatomae strain DSM 44892 is a notable bacterium characterized by the presence of flagella, which may contribute to its motility and adaptability in various environments. This strain has a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and regulation of its genomic functions. The genomic information for this strain is cataloged under the accession number FNDN00000000.1, which provides a reference for researchers interested in further exploring its genetic and functional attributes. Rhodococcus species, including R. triatomae, are known for their diverse metabolic capabilities, particularly in the biodegradation of various organic compounds. The presence of flagella in R. triatomae suggests potential advantages in environmental niches where mobility is beneficial for accessing nutrients or avoiding unfavorable conditions. This motility could enhance the bacterium's ecological role in soil and other environments where organic matter is abundant. The single replicon and the lack of complex replicon structures may indicate a level of genetic stability, which can be advantageous in maintaining essential functions necessary for survival and adaptation. Overall, the traits of Rhodococcus triatomae strain DSM 44892 highlight its potential ecological significance in nutrient cycling and biodegradation processes, particularly in environments rich in organic pollutants.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus triatomae
Strainstrain DSM 44892

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus triatomae strain DSM 44892 genome assembly, contig:

Gene Summary

Adenine Count

745590 bp

Thymine Count

734976 bp

Guanine Count

1605386 bp

Cytosine Count

1648546 bp

Genome Length

4734498 bp

Protein-coding Genes

4432 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein of unknown function duf262SAMN05444695_101298Not AvailableNegative329992 - 33165361423.6
atp-binding cassette, subfamily f, uupSAMN05444695_101299Not AvailableNegative331765 - 33354664464.7
4-diphosphocytidyl-2-c-methyl-d-erythritol kinaseSAMN05444695_101300Not AvailableNegative333601 - 33453031910.1
predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domainsSAMN05444695_101301Not AvailablePositive334648 - 33561636022.0
hypothetical proteinSAMN05444695_101302Not AvailablePositive335668 - 33615616449.9
cold-shock dna-binding protein familySAMN05444695_101303Not AvailableNegative336242 - 3364457198.26
hypothetical proteinSAMN05444695_101304Not AvailableNegative336716 - 3369829005.69
16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferaseSAMN05444695_101305Not AvailableNegative337034 - 33794832115.5
uncharacterized conserved protein yabe, contains g5 and tandem duf348 domainsSAMN05444695_101306Not AvailableNegative337974 - 33910139378.2
uncharacterized conserved protein yabe, contains g5 and tandem duf348 domainsSAMN05444695_101307Not AvailableNegative339117 - 34024439675.7

Displaying genes 301 – 310 of 3964 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.