Rhodococcus triatomae strain DSM 44892

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus triatomae strain DSM 44892 is a notable bacterium characterized by the presence of flagella, which may contribute to its motility and adaptability in various environments. This strain has a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and regulation of its genomic functions. The genomic information for this strain is cataloged under the accession number FNDN00000000.1, which provides a reference for researchers interested in further exploring its genetic and functional attributes. Rhodococcus species, including R. triatomae, are known for their diverse metabolic capabilities, particularly in the biodegradation of various organic compounds. The presence of flagella in R. triatomae suggests potential advantages in environmental niches where mobility is beneficial for accessing nutrients or avoiding unfavorable conditions. This motility could enhance the bacterium's ecological role in soil and other environments where organic matter is abundant. The single replicon and the lack of complex replicon structures may indicate a level of genetic stability, which can be advantageous in maintaining essential functions necessary for survival and adaptation. Overall, the traits of Rhodococcus triatomae strain DSM 44892 highlight its potential ecological significance in nutrient cycling and biodegradation processes, particularly in environments rich in organic pollutants.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus triatomae
Strainstrain DSM 44892

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus triatomae strain DSM 44892 genome assembly, contig:

Gene Summary

Adenine Count

745590 bp

Thymine Count

734976 bp

Guanine Count

1605386 bp

Cytosine Count

1648546 bp

Genome Length

4734498 bp

Protein-coding Genes

4432 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative peptidoglycan lipid ii flippaseSAMN05444695_108117Not AvailableNegative3182821 - 318426049170.6
putative drug exporter of the rnd superfamilySAMN05444695_108118Not AvailableNegative3184387 - 318669680931.4
dna-binding transcriptional regulator, lrp familySAMN05444695_108119Not AvailableNegative3187100 - 318761218360.2
indolepyruvate ferredoxin oxidoreductaseSAMN05444695_108120Not AvailablePositive3187798 - 3191349126020.0
phenazine biosynthesis protein phzf familySAMN05444695_108121Not AvailableNegative3191273 - 319212730093.5
cation:h+ antiporterSAMN05444695_108122Not AvailableNegative3192343 - 319329932846.3
hypothetical proteinSAMN05444695_108123Not AvailablePositive3193509 - 31937518672.52
dna-binding transcriptional regulator, acrr familySAMN05444695_108124Not AvailableNegative3193793 - 319438020215.0
polyketide cyclase / dehydrase and lipid transportSAMN05444695_108125Not AvailablePositive3194519 - 319504619584.1
drug resistance transporter, emrb/qaca subfamilySAMN05444695_108126Not AvailablePositive3195196 - 319693560907.2

Displaying genes 3001 – 3010 of 3964 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.