Rhodococcus triatomae strain DSM 44892

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus triatomae strain DSM 44892 is a notable bacterium characterized by the presence of flagella, which may contribute to its motility and adaptability in various environments. This strain has a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and regulation of its genomic functions. The genomic information for this strain is cataloged under the accession number FNDN00000000.1, which provides a reference for researchers interested in further exploring its genetic and functional attributes. Rhodococcus species, including R. triatomae, are known for their diverse metabolic capabilities, particularly in the biodegradation of various organic compounds. The presence of flagella in R. triatomae suggests potential advantages in environmental niches where mobility is beneficial for accessing nutrients or avoiding unfavorable conditions. This motility could enhance the bacterium's ecological role in soil and other environments where organic matter is abundant. The single replicon and the lack of complex replicon structures may indicate a level of genetic stability, which can be advantageous in maintaining essential functions necessary for survival and adaptation. Overall, the traits of Rhodococcus triatomae strain DSM 44892 highlight its potential ecological significance in nutrient cycling and biodegradation processes, particularly in environments rich in organic pollutants.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus triatomae
Strainstrain DSM 44892

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus triatomae strain DSM 44892 genome assembly, contig:

Gene Summary

Adenine Count

745590 bp

Thymine Count

734976 bp

Guanine Count

1605386 bp

Cytosine Count

1648546 bp

Genome Length

4734498 bp

Protein-coding Genes

4432 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
undecaprenyl-diphosphataseSAMN05444695_106133Not AvailablePositive2660662 - 266130922174.4
demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylaseSAMN05444695_106134Not AvailablePositive2661380 - 266201823115.7
geranylgeranyl reductase familySAMN05444695_106135Not AvailableNegative2662058 - 266332944846.2
heptaprenyl diphosphate synthaseSAMN05444695_106136Not AvailablePositive2663446 - 266453138198.0
heat shock protein htpxSAMN05444695_106137Not AvailablePositive2664652 - 266551831009.9
hypothetical proteinSAMN05444695_106138Not AvailableNegative2665641 - 266613218033.4
Trna-tyrNot AvailableNot AvailablePositive2666355 - 2666440Not Available
Trna-thrNot AvailableNot AvailablePositive2666662 - 2666734Not Available
Trna-metNot AvailableNot AvailablePositive2666780 - 2666852Not Available
lsu ribosomal protein l33pSAMN05444695_106142Not AvailablePositive2666916 - 26670836454.79

Displaying genes 2531 – 2540 of 3964 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.