Rhodococcus triatomae strain DSM 44892

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus triatomae strain DSM 44892 is a notable bacterium characterized by the presence of flagella, which may contribute to its motility and adaptability in various environments. This strain has a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and regulation of its genomic functions. The genomic information for this strain is cataloged under the accession number FNDN00000000.1, which provides a reference for researchers interested in further exploring its genetic and functional attributes. Rhodococcus species, including R. triatomae, are known for their diverse metabolic capabilities, particularly in the biodegradation of various organic compounds. The presence of flagella in R. triatomae suggests potential advantages in environmental niches where mobility is beneficial for accessing nutrients or avoiding unfavorable conditions. This motility could enhance the bacterium's ecological role in soil and other environments where organic matter is abundant. The single replicon and the lack of complex replicon structures may indicate a level of genetic stability, which can be advantageous in maintaining essential functions necessary for survival and adaptation. Overall, the traits of Rhodococcus triatomae strain DSM 44892 highlight its potential ecological significance in nutrient cycling and biodegradation processes, particularly in environments rich in organic pollutants.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus triatomae
Strainstrain DSM 44892

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus triatomae strain DSM 44892 genome assembly, contig:

Gene Summary

Adenine Count

745590 bp

Thymine Count

734976 bp

Guanine Count

1605386 bp

Cytosine Count

1648546 bp

Genome Length

4734498 bp

Protein-coding Genes

4432 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
predicted phosphohydrolase, mpp superfamilySAMN05444695_105280Not AvailableNegative2483856 - 248481835010.8
hypothetical proteinSAMN05444695_105281Not AvailablePositive2484929 - 248539616778.0
membrane carboxypeptidase (penicillin-binding protein)SAMN05444695_105282Not AvailableNegative2485473 - 248785483219.3
whib family transcriptional regulator, redox-sensing transcriptional regulatorSAMN05444695_105283Not AvailablePositive2488220 - 248855512447.7
arsenite-transporting atpaseSAMN05444695_105284Not AvailableNegative2488590 - 248977441766.0
anion-transporting atpase, arsa/get3 familySAMN05444695_105285Not AvailableNegative2489776 - 249081335846.9
protein of unknown functionSAMN05444695_105286Not AvailablePositive2490868 - 24910326053.11
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN05444695_105287Not AvailablePositive2491038 - 249152916474.7
glyoxylase, beta-lactamase superfamily iiSAMN05444695_105288Not AvailablePositive2491535 - 249236229362.6
transcriptional regulator /transcriptional regulator, crp/fnr familySAMN05444695_105289Not AvailableNegative2492451 - 249312524841.9

Displaying genes 2351 – 2360 of 3964 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.