Rhodococcus triatomae strain DSM 44892

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus triatomae strain DSM 44892 is a notable bacterium characterized by the presence of flagella, which may contribute to its motility and adaptability in various environments. This strain has a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and regulation of its genomic functions. The genomic information for this strain is cataloged under the accession number FNDN00000000.1, which provides a reference for researchers interested in further exploring its genetic and functional attributes. Rhodococcus species, including R. triatomae, are known for their diverse metabolic capabilities, particularly in the biodegradation of various organic compounds. The presence of flagella in R. triatomae suggests potential advantages in environmental niches where mobility is beneficial for accessing nutrients or avoiding unfavorable conditions. This motility could enhance the bacterium's ecological role in soil and other environments where organic matter is abundant. The single replicon and the lack of complex replicon structures may indicate a level of genetic stability, which can be advantageous in maintaining essential functions necessary for survival and adaptation. Overall, the traits of Rhodococcus triatomae strain DSM 44892 highlight its potential ecological significance in nutrient cycling and biodegradation processes, particularly in environments rich in organic pollutants.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus triatomae
Strainstrain DSM 44892

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus triatomae strain DSM 44892 genome assembly, contig:

Gene Summary

Adenine Count

745590 bp

Thymine Count

734976 bp

Guanine Count

1605386 bp

Cytosine Count

1648546 bp

Genome Length

4734498 bp

Protein-coding Genes

4432 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05444695_104135Not AvailablePositive1971848 - 19720155884.16
regulatory protein, luxr familySAMN05444695_104136Not AvailablePositive1972056 - 197272424630.6
hnh endonucleaseSAMN05444695_104137Not AvailableNegative1972771 - 197413848779.9
magnesium transporterSAMN05444695_104138Not AvailablePositive1974440 - 197557342139.2
atp-dependent dna ligaseSAMN05444695_104139Not AvailablePositive1975657 - 197670038411.8
dna ligase dSAMN05444695_104140Not AvailablePositive1976700 - 197772838103.9
hypothetical proteinSAMN05444695_104141Not AvailableNegative1977786 - 197835519508.9
hypothetical proteinSAMN05444695_104142Not AvailablePositive1978545 - 197904515537.2
cubico group peptidase, beta-lactamase class c familySAMN05444695_104143Not AvailablePositive1979121 - 198032643791.3
ferredoxin--nadp+ reductaseSAMN05444695_104144Not AvailablePositive1980399 - 198207560285.1

Displaying genes 1871 – 1880 of 3964 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.