Rhodococcus triatomae strain DSM 44892

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus triatomae strain DSM 44892 is a notable bacterium characterized by the presence of flagella, which may contribute to its motility and adaptability in various environments. This strain has a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and regulation of its genomic functions. The genomic information for this strain is cataloged under the accession number FNDN00000000.1, which provides a reference for researchers interested in further exploring its genetic and functional attributes. Rhodococcus species, including R. triatomae, are known for their diverse metabolic capabilities, particularly in the biodegradation of various organic compounds. The presence of flagella in R. triatomae suggests potential advantages in environmental niches where mobility is beneficial for accessing nutrients or avoiding unfavorable conditions. This motility could enhance the bacterium's ecological role in soil and other environments where organic matter is abundant. The single replicon and the lack of complex replicon structures may indicate a level of genetic stability, which can be advantageous in maintaining essential functions necessary for survival and adaptation. Overall, the traits of Rhodococcus triatomae strain DSM 44892 highlight its potential ecological significance in nutrient cycling and biodegradation processes, particularly in environments rich in organic pollutants.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus triatomae
Strainstrain DSM 44892

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus triatomae strain DSM 44892 genome assembly, contig:

Gene Summary

Adenine Count

745590 bp

Thymine Count

734976 bp

Guanine Count

1605386 bp

Cytosine Count

1648546 bp

Genome Length

4734498 bp

Protein-coding Genes

4432 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alkylated dna nucleotide flippase atl1, participates in nucleotide excision repair, ada-like dna-binding domainSAMN05444695_103175Not AvailablePositive1623660 - 162395910490.5
dna-binding transcriptional regulator, mocr family, contains an aminotransferase domainSAMN05444695_103176Not AvailableNegative1623992 - 162544950581.6
drug resistance transporter, emrb/qaca subfamilySAMN05444695_103177Not AvailableNegative1625550 - 162723858926.8
dna-binding transcriptional regulator, acrr familySAMN05444695_103178Not AvailableNegative1627307 - 162796923329.4
molybdenum cofactor synthesis domain-containing proteinSAMN05444695_103179Not AvailablePositive1628043 - 162981860529.4
sirohydrochlorin ferrochelataseSAMN05444695_103180Not AvailableNegative1629822 - 163050223416.0
uroporphyrinogen-iii synthaseSAMN05444695_103181Not AvailableNegative1630499 - 163164140353.7
nitrite reductase (nadh) small subunitSAMN05444695_103182Not AvailableNegative1631638 - 163204814606.6
nitrite reductase (nadh) large subunitSAMN05444695_103183Not AvailableNegative1632171 - 163469988527.7
mfs transporter, nnp family, nitrate/nitrite transporterSAMN05444695_103184Not AvailableNegative1634787 - 163621750142.2

Displaying genes 1531 – 1540 of 3964 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.