Rhodococcus tukisamuensis strain JCM 11308

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus tukisamuensis strain JCM 11308 is a mesophilic bacterium characterized by the presence of flagella, which suggests motility in its habitat. This strain thrives optimally at a temperature of 29°C, indicating its preference for warm environments within the mesophilic range. The genomic structure of R. tukisamuensis JCM 11308 is notable for having a single replicon, which may reflect a stable genetic organization. The sequence data for this strain is available under the accession FNAB00000000.1, providing a resource for further genomic studies. Ecologically, the presence of flagella in R. tukisamuensis JCM 11308 may facilitate its movement in various environments, potentially allowing it to colonize diverse substrates or interact with other microorganisms. This motility could contribute to its ecological role in nutrient cycling and bioremediation processes, which are often associated with the Rhodococcus genus.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus tukisamuensis
Strainstrain JCM 11308

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus tukisamuensis strain JCM 11308 genome assembly,

Gene Summary

Adenine Count

824122 bp

Thymine Count

831111 bp

Guanine Count

1926263 bp

Cytosine Count

1907513 bp

Genome Length

5489009 bp

Protein-coding Genes

4993 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-oxoacyl-[acyl-carrier protein] reductaseSAMN05444580_12615Not AvailablePositive5416304 - 541706826156.4
lysr family transcriptional regulator, hydrogen peroxide-inducible genes activatorSAMN05444580_12616Not AvailableNegative5417228 - 541813032481.4
3-oxoacyl-[acyl-carrier protein] reductaseSAMN05444580_12617Not AvailableNegative5418372 - 541907023723.7
nitt/taut family transport system permease proteinSAMN05444580_12618Not AvailableNegative5419089 - 541991929847.9
3-oxoacyl-[acyl-carrier protein] reductaseSAMN05444580_12619Not AvailableNegative5420029 - 542085327991.2
tat (twin-arginine translocation) pathway signal sequenceSAMN05444580_12620Not AvailablePositive5421296 - 542245940014.6
nitt/taut family transport system atp-binding proteinSAMN05444580_12621Not AvailablePositive5422506 - 542333631144.2
3-oxoadipate enol-lactonaseSAMN05444580_12622Not AvailablePositive5423377 - 542420729748.1
4-hydroxyacetophenone monooxygenaseSAMN05444580_12623Not AvailablePositive5424279 - 542618670936.6
pimeloyl-acp methyl ester carboxylesteraseSAMN05444580_12624Not AvailablePositive5426259 - 542712230629.2

Displaying genes 4991 – 5000 of 5055 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.