Rhodococcus tukisamuensis strain JCM 11308

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus tukisamuensis strain JCM 11308 is a mesophilic bacterium characterized by the presence of flagella, which suggests motility in its habitat. This strain thrives optimally at a temperature of 29°C, indicating its preference for warm environments within the mesophilic range. The genomic structure of R. tukisamuensis JCM 11308 is notable for having a single replicon, which may reflect a stable genetic organization. The sequence data for this strain is available under the accession FNAB00000000.1, providing a resource for further genomic studies. Ecologically, the presence of flagella in R. tukisamuensis JCM 11308 may facilitate its movement in various environments, potentially allowing it to colonize diverse substrates or interact with other microorganisms. This motility could contribute to its ecological role in nutrient cycling and bioremediation processes, which are often associated with the Rhodococcus genus.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus tukisamuensis
Strainstrain JCM 11308

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus tukisamuensis strain JCM 11308 genome assembly,

Gene Summary

Adenine Count

824122 bp

Thymine Count

831111 bp

Guanine Count

1926263 bp

Cytosine Count

1907513 bp

Genome Length

5489009 bp

Protein-coding Genes

4993 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh dehydrogenase subunit kSAMN05444580_11525Not AvailablePositive4605277 - 460557610900.7
nadh-quinone oxidoreductase subunit lSAMN05444580_11526Not AvailablePositive4605573 - 460746866059.6
nadh-quinone oxidoreductase subunit mSAMN05444580_11527Not AvailablePositive4607465 - 460906356192.8
nadh-quinone oxidoreductase subunit nSAMN05444580_11528Not AvailablePositive4609060 - 461065554465.3
nicotinamide mononucleotide transporterSAMN05444580_11529Not AvailablePositive4610704 - 461136624391.0
hypothetical proteinSAMN05444580_11530Not AvailablePositive4611467 - 461201218010.3
two-component system, ompr family, response regulator prraSAMN05444580_11531Not AvailablePositive4612065 - 461276625045.4
two-component system, ompr family, sensor histidine kinase prrbSAMN05444580_11532Not AvailablePositive4612763 - 461408246217.1
short-chain dehydrogenaseSAMN05444580_11533Not AvailableNegative4614079 - 461493330070.3
enoyl-coa hydrataseSAMN05444580_11534Not AvailableNegative4615000 - 461600135080.7

Displaying genes 4231 – 4240 of 5055 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.