Rhodococcus tukisamuensis strain JCM 11308

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus tukisamuensis strain JCM 11308 is a mesophilic bacterium characterized by the presence of flagella, which suggests motility in its habitat. This strain thrives optimally at a temperature of 29°C, indicating its preference for warm environments within the mesophilic range. The genomic structure of R. tukisamuensis JCM 11308 is notable for having a single replicon, which may reflect a stable genetic organization. The sequence data for this strain is available under the accession FNAB00000000.1, providing a resource for further genomic studies. Ecologically, the presence of flagella in R. tukisamuensis JCM 11308 may facilitate its movement in various environments, potentially allowing it to colonize diverse substrates or interact with other microorganisms. This motility could contribute to its ecological role in nutrient cycling and bioremediation processes, which are often associated with the Rhodococcus genus.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus tukisamuensis
Strainstrain JCM 11308

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus tukisamuensis strain JCM 11308 genome assembly,

Gene Summary

Adenine Count

824122 bp

Thymine Count

831111 bp

Guanine Count

1926263 bp

Cytosine Count

1907513 bp

Genome Length

5489009 bp

Protein-coding Genes

4993 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
leucine dehydrogenaseSAMN05444580_106181Not AvailableNegative3087245 - 308826134791.5
basic amino acid/polyamine antiporter, apa familySAMN05444580_106182Not AvailablePositive3088655 - 309018753651.4
putative oxidoreductaseSAMN05444580_106183Not AvailableNegative3090221 - 309112931411.8
glucose/arabinose dehydrogenase, beta-propeller foldSAMN05444580_106184Not AvailablePositive3091219 - 309238538876.8
dna-binding transcriptional regulator, acrr familySAMN05444580_106185Not AvailableNegative3092443 - 309300319632.7
hypothetical proteinSAMN05444580_106186Not AvailablePositive3093176 - 309349311257.6
hypothetical proteinSAMN05444580_106187Not AvailablePositive3093490 - 309424225373.3
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05444580_106188Not AvailablePositive3094380 - 309519528014.4
kef-type k+ transport system, membrane component kefbSAMN05444580_106189Not AvailableNegative3095255 - 309646341280.1
aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit bSAMN05444580_106190Not AvailableNegative3096555 - 309807554503.7

Displaying genes 2881 – 2890 of 5055 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.