Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus tukisamuensis |
| Strain | strain JCM 11308 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
824122 bp
Thymine Count
831111 bp
Guanine Count
1926263 bp
Cytosine Count
1907513 bp
Genome Length
5489009 bp
Protein-coding Genes
4993 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p | SAMN05444580_10285 | Not Available | Negative | 1048039 - 1048602 | 20675.5 |
| xaa-pro dipeptidase | SAMN05444580_10286 | Not Available | Negative | 1048619 - 1049725 | 38780.2 |
| hypothetical protein | SAMN05444580_10287 | Not Available | Positive | 1049856 - 1050638 | 27176.7 |
| 3-dehydroquinate dehydratase | SAMN05444580_10288 | Not Available | Negative | 1050760 - 1051173 | 14433.2 |
| 3-dehydroquinate synthase | SAMN05444580_10289 | Not Available | Negative | 1051182 - 1052342 | 40817.1 |
| shikimate kinase | SAMN05444580_10290 | Not Available | Negative | 1052348 - 1052851 | 18278.1 |
| chorismate synthase | SAMN05444580_10291 | Not Available | Negative | 1052871 - 1054070 | 41522.7 |
| leader peptidase (prepilin peptidase) / n-methyltransferase | SAMN05444580_10292 | Not Available | Negative | 1054105 - 1054629 | 16503.6 |
| triacylglycerol lipase | SAMN05444580_10293 | Not Available | Positive | 1054778 - 1055611 | 28910.9 |
| shikimate dehydrogenase | SAMN05444580_10294 | Not Available | Negative | 1055615 - 1056466 | 28944.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

