Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell envelope biogenesis protein ompa | DER08_04865 | Not Available | Positive | 1024298 - 1025713 | 50049.1 |
| pd-(d/e)xk nuclease family protein | DER08_04870 | Not Available | Positive | 1025777 - 1028542 | 105907.0 |
| alpha/beta hydrolase | DER08_04875 | Not Available | Negative | 1028539 - 1029327 | 29745.0 |
| x-pro aminopeptidase | DER08_04880 | Not Available | Negative | 1029517 - 1030809 | 49651.3 |
| hydroxymethylglutaryl-coa synthase | DER08_04885 | Not Available | Negative | 1030838 - 1032199 | 50785.4 |
| hypothetical protein | DER08_04890 | Not Available | Negative | 1032234 - 1032413 | 7357.33 |
| succinate dehydrogenase | DER08_04895 | Not Available | Positive | 1032552 - 1033379 | 30819.1 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | DER08_04900 | Not Available | Positive | 1033398 - 1035407 | 74088.6 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | DER08_04905 | Not Available | Positive | 1035416 - 1036177 | 27508.8 |
| hypothetical protein | DER08_04910 | Not Available | Negative | 1036235 - 1036795 | 21197.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
