Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3575 domain-containing protein | DER08_04815 | Not Available | Negative | 1012377 - 1012904 | 19741.6 |
| thiamine-phosphate kinase | DER08_04820 | Not Available | Negative | 1012997 - 1014043 | 38202.7 |
| elongation factor 4 | DER08_04825 | Not Available | Negative | 1014180 - 1015976 | 66785.9 |
| hypothetical protein | DER08_04830 | Not Available | Negative | 1016133 - 1016795 | 24259.0 |
| hypothetical protein | DER08_04835 | Not Available | Negative | 1016808 - 1017164 | 12688.4 |
| trna dihydrouridine synthase dusb | DER08_04840 | Not Available | Positive | 1017338 - 1018330 | 37471.2 |
| abc transporter permease | DER08_04845 | Not Available | Negative | 1018337 - 1019536 | 44249.8 |
| 30s ribosome-binding factor rbfa | DER08_04850 | Not Available | Negative | 1019538 - 1019930 | 14787.0 |
| atp-dependent helicase | DER08_04855 | Not Available | Positive | 1020110 - 1023259 | 120246.0 |
| hypothetical protein | DER08_04860 | Not Available | Positive | 1023464 - 1024105 | 23085.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
