Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease iii | DER08_04765 | Not Available | Negative | 1002347 - 1003087 | 28281.2 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | DER08_04770 | Not Available | Negative | 1003097 - 1004350 | 44733.3 |
| acyl carrier protein | DER08_04775 | Not Available | Negative | 1004529 - 1004765 | 8577.98 |
| phosphoribosylglycinamide formyltransferase | DER08_04780 | Not Available | Positive | 1004941 - 1005507 | 21023.4 |
| ribonuclease hi | DER08_04785 | Not Available | Positive | 1005557 - 1006036 | 18518.3 |
| sugar kinase | DER08_04790 | Not Available | Positive | 1006143 - 1007066 | 33862.8 |
| amidophosphoribosyltransferase | DER08_04795 | Not Available | Positive | 1007139 - 1009037 | 71775.2 |
| superoxide dismutase | DER08_04800 | Not Available | Negative | 1009276 - 1009884 | 22463.5 |
| amidophosphoribosyltransferase | DER08_04805 | Not Available | Negative | 1009978 - 1010661 | 25593.2 |
| glycine--trna ligase | DER08_04810 | Not Available | Positive | 1010760 - 1012307 | 59835.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
