Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol acyltransferase | DER08_04665 | Not Available | Negative | 976751 - 978553 | 69204.3 |
| exodeoxyribonuclease iii | DER08_04670 | Not Available | Positive | 978694 - 979458 | 29396.2 |
| cell envelope biogenesis protein ompa | DER08_04675 | Not Available | Positive | 979547 - 980488 | 34482.1 |
| nadp(h)-dependent aldo-keto reductase | DER08_04680 | Not Available | Positive | 980638 - 981675 | 39004.5 |
| glycosyl transferase | DER08_04685 | Not Available | Negative | 981764 - 983755 | 76050.8 |
| 5-formyltetrahydrofolate cyclo-ligase | DER08_04690 | Not Available | Negative | 983817 - 984380 | 21425.9 |
| excinuclease abc subunit c | DER08_04695 | Not Available | Positive | 984498 - 986291 | 68775.6 |
| patatin | DER08_04700 | Not Available | Positive | 986297 - 988624 | 87211.9 |
| duf3108 domain-containing protein | DER08_04705 | Not Available | Positive | 989033 - 989803 | 29658.7 |
| tryptophan 2,3-dioxygenase | DER08_04710 | Not Available | Positive | 989803 - 990741 | 37305.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
