Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | DER08_04615 | Not Available | Negative | 966374 - 967057 | 26011.4 |
| methionine--trna ligase | DER08_04620 | Not Available | Negative | 967064 - 969154 | 78301.1 |
| serine--trna ligase | DER08_04625 | Not Available | Positive | 969369 - 970640 | 47535.0 |
| duf4286 domain-containing protein | DER08_04630 | Not Available | Positive | 970805 - 971119 | 12127.5 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | DER08_04635 | Not Available | Positive | 971157 - 971936 | 29756.0 |
| magnesium transporter | DER08_04640 | Not Available | Positive | 971926 - 973278 | 50012.7 |
| pyrroline-5-carboxylate reductase | DER08_04645 | Not Available | Positive | 973330 - 974106 | 27442.2 |
| na+/h+ antiporter nhaa | DER08_04650 | Not Available | Negative | 974152 - 975291 | 40833.1 |
| hydroxyacid dehydrogenase | DER08_04655 | Not Available | Positive | 975382 - 976326 | 34895.6 |
| hypothetical protein | DER08_04660 | Not Available | Positive | 976341 - 976622 | 10505.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
