Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-coa--3-ketoacid-coa transferase | DER08_04515 | Not Available | Negative | 946929 - 947588 | 23435.7 |
| succinyl-coa--3-ketoacid-coa transferase | DER08_04520 | Not Available | Negative | 947625 - 948323 | 25457.7 |
| penicillin-binding protein | DER08_04525 | Not Available | Negative | 948483 - 950792 | 86823.4 |
| gliding motility lipoprotein gldh | DER08_04530 | Not Available | Negative | 950809 - 951288 | 18426.1 |
| hypothetical protein | DER08_04535 | Not Available | Negative | 951272 - 952567 | 48586.6 |
| hypothetical protein | DER08_04540 | Not Available | Negative | 952726 - 954087 | 51513.5 |
| brxa/brxb family bacilliredoxin | DER08_04545 | Not Available | Negative | 954235 - 954645 | 14761.7 |
| lycopene cyclase | DER08_04550 | Not Available | Negative | 954771 - 955916 | 44497.1 |
| zip family metal transporter | DER08_04555 | Not Available | Positive | 956006 - 956824 | 28928.0 |
| feob-associated cys-rich membrane protein | DER08_04560 | Not Available | Negative | 956821 - 956943 | 4495.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
