Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | DER08_04465 | Not Available | Positive | 936856 - 937881 | 38288.5 |
| oxygen-dependent coproporphyrinogen oxidase | DER08_04470 | Not Available | Positive | 937920 - 938822 | 34937.2 |
| hypothetical protein | DER08_04475 | Not Available | Positive | 938906 - 939550 | 24668.5 |
| porphobilinogen synthase | DER08_04480 | Not Available | Positive | 939556 - 940551 | 36728.6 |
| cysteine methyltransferase | DER08_04485 | Not Available | Positive | 940693 - 941166 | 17156.8 |
| 3'-5' exonuclease | DER08_04490 | Not Available | Positive | 941286 - 941999 | 27919.5 |
| duf1572 domain-containing protein | DER08_04495 | Not Available | Positive | 942012 - 942482 | 18155.5 |
| spore maturation protein | DER08_04500 | Not Available | Positive | 942572 - 943996 | 51608.7 |
| fumarate hydratase | DER08_04505 | Not Available | Positive | 944117 - 945718 | 58730.4 |
| esterase | DER08_04510 | Not Available | Negative | 945767 - 946921 | 42912.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
