Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DER08_00405 | Not Available | Negative | 85915 - 87309 | 54939.1 |
| aspartate aminotransferase family protein | DER08_00410 | Not Available | Negative | 87425 - 88612 | 43426.9 |
| osta-like protein | DER08_00415 | Not Available | Negative | 88652 - 90208 | 59195.7 |
| alpha-amylase | DER08_00420 | Not Available | Positive | 90431 - 92293 | 70628.1 |
| superoxide dismutase | DER08_00425 | Not Available | Negative | 92304 - 93074 | 29186.5 |
| phosphatidylserine decarboxylase | DER08_00430 | Not Available | Negative | 93082 - 93351 | 10377.2 |
| phosphatidylserine decarboxylase family protein | DER08_00435 | Not Available | Negative | 93351 - 94004 | 24276.0 |
| phosphatidate cytidylyltransferase | DER08_00440 | Not Available | Negative | 93994 - 94884 | 33617.2 |
| lactate utilization protein b/c | DER08_00445 | Not Available | Negative | 94886 - 95488 | 23068.3 |
| peptidase m41 | DER08_00450 | Not Available | Negative | 95599 - 97521 | 70442.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
