Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta' | DER08_04365 | Not Available | Negative | 914880 - 916028 | 43286.8 |
| hypothetical protein | DER08_04370 | Not Available | Positive | 916451 - 919354 | 104317.0 |
| hypothetical protein | DER08_04375 | Not Available | Positive | 919373 - 920341 | 36738.5 |
| phosphoglycerate kinase | DER08_04380 | Not Available | Positive | 920502 - 921689 | 42085.7 |
| lytic transglycosylase | DER08_04385 | Not Available | Positive | 921947 - 923926 | 75081.4 |
| duf4837 domain-containing protein | DER08_04390 | Not Available | Positive | 923975 - 924970 | 37680.7 |
| gnat family n-acetyltransferase | DER08_04395 | Not Available | Positive | 924976 - 925425 | 17255.8 |
| ribonuclease p protein component | DER08_04400 | Not Available | Negative | 925447 - 925842 | 15488.8 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DER08_04405 | Not Available | Positive | 925967 - 926701 | 27637.1 |
| acyl-acp desaturase | DER08_04410 | Not Available | Positive | 926713 - 927699 | 38555.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
